Coverage Report – barcode02_04 - Lagopus muta

This report provides a detailed overview of genome coverage based on sequencing data from a field-collected sample. It is intended to help assess the overall quality of the sample by evaluating how well and how evenly the genome is covered. The included statistics and plots allow you to determine whether the sequencing data is sufficient to support downstream applications such as genome assembly or taxonomic profiling. This overview is especially useful for making quick decisions in field settings — for example, to judge whether a sample warrants further processing or whether additional sequencing may be required.

Genome-wide Summary

Coverage Statistics
MetricValue
Mean0.59×
Median0.00×
Min0.00×
Max1168.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage640.70 Mb (62.4%)
1–5× Coverage381.43 Mb (37.1%)
6–10× Coverage3.52 Mb (0.3%)
>10× Coverage1.12 Mb (0.1%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×386.07 Mb (37.6%)
Breadth ≥ 2×117.62 Mb (11.5%)
Breadth ≥ 5×8.41 Mb (0.8%)
Breadth ≥ 10×1.32 Mb (0.1%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Mapped Reads

For Lagopus muta, a total of 691,811 primary mapped reads were detected based on the reference alignment. This includes only reads that are mapped, non-secondary, and non-supplementary.

Sequencing output
MetricValue
Total Sequenced Bases607.56 Mb
Reference Genome Size1026.77 Mb

Sequencing yield compared to reference genome length.

Breadth of Coverage per Region

This plot shows the percentage of each region that is covered by at least one read. Regions with high breadth are likely to be informative for downstream analyses such as (reference-guided) assembly or alignment-based profiling.
The breadth of coverage refers to the percentage of genome bases sequenced at or above a given sequencing depth.

Coverage distribution

This cumulative plot shows the percentage of bases in the genome that are covered at or above a given coverage threshold (e.g., 10×). It provides a quick overview of how much of the genome meets typical analysis requirements. For example, if 95% of bases have ≥10× coverage, variant calling is likely reliable for most regions.

Coverage heatmap


Adjust this slider to change the upper limit of the color scale. Lower values increase contrast in low-coverage regions, while higher values reveal high-coverage peaks.

This heatmap provides a chromosome-by-position overview of coverage depth across the genome. Each cell represents a fixed-size genomic bin (100.0 kb), colored by its average coverage.

Chromosome-wise Coverage Analysis


chromosome 1

Coverage Statistics
MetricValue
Mean0.46×
Median0.00×
Min0.00×
Max22.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage127.89 Mb (65.6%)
1–5× Coverage66.67 Mb (34.2%)
6–10× Coverage316.3 kb (0.2%)
>10× Coverage30.8 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×67.02 Mb (34.4%)
Breadth ≥ 2×16.01 Mb (8.2%)
Breadth ≥ 5×659.1 kb (0.3%)
Breadth ≥ 10×45.5 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 1, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 2

Coverage Statistics
MetricValue
Mean0.45×
Median0.00×
Min0.00×
Max60.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage72.56 Mb (65.7%)
1–5× Coverage37.79 Mb (34.2%)
6–10× Coverage85.2 kb (0.1%)
>10× Coverage5.2 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×37.88 Mb (34.3%)
Breadth ≥ 2×8.90 Mb (8.1%)
Breadth ≥ 5×211.3 kb (0.2%)
Breadth ≥ 10×7.5 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 2, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 3

Coverage Statistics
MetricValue
Mean0.45×
Median0.00×
Min0.00×
Max46.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage62.23 Mb (65.8%)
1–5× Coverage32.24 Mb (34.1%)
6–10× Coverage90.2 kb (0.1%)
>10× Coverage17.0 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×32.34 Mb (34.2%)
Breadth ≥ 2×7.44 Mb (7.9%)
Breadth ≥ 5×215.0 kb (0.2%)
Breadth ≥ 10×21.9 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 3, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 3 unlocalized

Coverage Statistics
MetricValue
Mean1.52×
Median1.00×
Min0.00×
Max47.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage144.7 kb (40.7%)
1–5× Coverage196.4 kb (55.2%)
6–10× Coverage8.4 kb (2.4%)
>10× Coverage6.3 kb (1.8%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×211.1 kb (59.3%)
Breadth ≥ 2×115.1 kb (32.3%)
Breadth ≥ 5×20.1 kb (5.7%)
Breadth ≥ 10×7.2 kb (2.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 3 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 4

Coverage Statistics
MetricValue
Mean0.47×
Median0.00×
Min0.00×
Max71.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage46.15 Mb (64.8%)
1–5× Coverage24.98 Mb (35.1%)
6–10× Coverage92.5 kb (0.1%)
>10× Coverage1.7 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×25.08 Mb (35.2%)
Breadth ≥ 2×6.11 Mb (8.6%)
Breadth ≥ 5×223.0 kb (0.3%)
Breadth ≥ 10×3.4 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 4, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 5

Coverage Statistics
MetricValue
Mean0.55×
Median0.00×
Min0.00×
Max29.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage40.75 Mb (61.9%)
1–5× Coverage25.00 Mb (37.9%)
6–10× Coverage114.3 kb (0.2%)
>10× Coverage15.0 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×25.13 Mb (38.1%)
Breadth ≥ 2×7.36 Mb (11.2%)
Breadth ≥ 5×295.6 kb (0.4%)
Breadth ≥ 10×18.1 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 5, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 6

Coverage Statistics
MetricValue
Mean0.49×
Median0.00×
Min0.00×
Max19.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage38.03 Mb (63.8%)
1–5× Coverage21.46 Mb (36.0%)
6–10× Coverage90.5 kb (0.2%)
>10× Coverage3.8 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×21.56 Mb (36.2%)
Breadth ≥ 2×5.53 Mb (9.3%)
Breadth ≥ 5×206.0 kb (0.3%)
Breadth ≥ 10×6.7 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 6, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 7

Coverage Statistics
MetricValue
Mean0.49×
Median0.00×
Min0.00×
Max11.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage33.48 Mb (64.5%)
1–5× Coverage18.35 Mb (35.3%)
6–10× Coverage80.5 kb (0.2%)
>10× Coverage273 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×18.43 Mb (35.5%)
Breadth ≥ 2×4.73 Mb (9.1%)
Breadth ≥ 5×204.2 kb (0.4%)
Breadth ≥ 10×1.4 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 7, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 8

Coverage Statistics
MetricValue
Mean0.55×
Median0.00×
Min0.00×
Max22.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage22.56 Mb (61.4%)
1–5× Coverage14.10 Mb (38.4%)
6–10× Coverage87.2 kb (0.2%)
>10× Coverage7.3 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×14.19 Mb (38.6%)
Breadth ≥ 2×4.16 Mb (11.3%)
Breadth ≥ 5×185.3 kb (0.5%)
Breadth ≥ 10×10.4 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 8, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 9

Coverage Statistics
MetricValue
Mean0.60×
Median0.00×
Min0.00×
Max21.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage13.84 Mb (59.5%)
1–5× Coverage9.35 Mb (40.2%)
6–10× Coverage53.6 kb (0.2%)
>10× Coverage3.2 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×9.41 Mb (40.5%)
Breadth ≥ 2×2.86 Mb (12.3%)
Breadth ≥ 5×144.8 kb (0.6%)
Breadth ≥ 10×4.9 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 9, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 10

Coverage Statistics
MetricValue
Mean0.65×
Median0.00×
Min0.00×
Max15.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage11.45 Mb (57.5%)
1–5× Coverage8.42 Mb (42.3%)
6–10× Coverage44.5 kb (0.2%)
>10× Coverage2.5 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×8.47 Mb (42.5%)
Breadth ≥ 2×2.87 Mb (14.4%)
Breadth ≥ 5×129.3 kb (0.6%)
Breadth ≥ 10×3.4 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 10, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 11

Coverage Statistics
MetricValue
Mean0.65×
Median0.00×
Min0.00×
Max95.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage11.66 Mb (58.8%)
1–5× Coverage8.09 Mb (40.8%)
6–10× Coverage82.2 kb (0.4%)
>10× Coverage8.9 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×8.19 Mb (41.2%)
Breadth ≥ 2×2.71 Mb (13.7%)
Breadth ≥ 5×184.2 kb (0.9%)
Breadth ≥ 10×14.3 kb (0.1%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 11, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 12

Coverage Statistics
MetricValue
Mean0.66×
Median0.00×
Min0.00×
Max15.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage11.27 Mb (58.4%)
1–5× Coverage7.95 Mb (41.2%)
6–10× Coverage79.1 kb (0.4%)
>10× Coverage2.4 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×8.03 Mb (41.6%)
Breadth ≥ 2×2.82 Mb (14.6%)
Breadth ≥ 5×197.2 kb (1.0%)
Breadth ≥ 10×5.2 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 12, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 13

Coverage Statistics
MetricValue
Mean0.62×
Median0.00×
Min0.00×
Max231.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage11.19 Mb (58.7%)
1–5× Coverage7.82 Mb (41.0%)
6–10× Coverage37.1 kb (0.2%)
>10× Coverage2.9 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×7.86 Mb (41.3%)
Breadth ≥ 2×2.57 Mb (13.5%)
Breadth ≥ 5×102.3 kb (0.5%)
Breadth ≥ 10×5.1 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 13, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 14

Coverage Statistics
MetricValue
Mean0.66×
Median0.00×
Min0.00×
Max26.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage10.29 Mb (57.3%)
1–5× Coverage7.62 Mb (42.4%)
6–10× Coverage58.3 kb (0.3%)
>10× Coverage6.2 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×7.68 Mb (42.7%)
Breadth ≥ 2×2.60 Mb (14.5%)
Breadth ≥ 5×136.1 kb (0.8%)
Breadth ≥ 10×7.3 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 14, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 15

Coverage Statistics
MetricValue
Mean0.71×
Median0.00×
Min0.00×
Max11.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage8.57 Mb (55.8%)
1–5× Coverage6.72 Mb (43.8%)
6–10× Coverage56.5 kb (0.4%)
>10× Coverage113 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×6.78 Mb (44.2%)
Breadth ≥ 2×2.54 Mb (16.5%)
Breadth ≥ 5×165.4 kb (1.1%)
Breadth ≥ 10×615 bp (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 15, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 16

Coverage Statistics
MetricValue
Mean0.77×
Median0.00×
Min0.00×
Max13.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage7.90 Mb (53.8%)
1–5× Coverage6.71 Mb (45.7%)
6–10× Coverage73.0 kb (0.5%)
>10× Coverage480 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×6.78 Mb (46.2%)
Breadth ≥ 2×2.70 Mb (18.4%)
Breadth ≥ 5×164.7 kb (1.1%)
Breadth ≥ 10×980 bp (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 16, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 17

Coverage Statistics
MetricValue
Mean0.73×
Median0.00×
Min0.00×
Max10.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage6.91 Mb (54.5%)
1–5× Coverage5.74 Mb (45.2%)
6–10× Coverage36.4 kb (0.3%)
>10× Coverage0 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×5.78 Mb (45.5%)
Breadth ≥ 2×2.17 Mb (17.1%)
Breadth ≥ 5×106.1 kb (0.8%)
Breadth ≥ 10×138 bp (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 17, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 18

Coverage Statistics
MetricValue
Mean0.80×
Median0.00×
Min0.00×
Max12.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage5.64 Mb (51.8%)
1–5× Coverage5.21 Mb (47.8%)
6–10× Coverage47.9 kb (0.4%)
>10× Coverage525 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×5.25 Mb (48.2%)
Breadth ≥ 2×2.07 Mb (19.0%)
Breadth ≥ 5×143.5 kb (1.3%)
Breadth ≥ 10×1.3 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 18, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 19

Coverage Statistics
MetricValue
Mean0.84×
Median0.00×
Min0.00×
Max20.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage5.27 Mb (50.4%)
1–5× Coverage5.13 Mb (49.1%)
6–10× Coverage51.7 kb (0.5%)
>10× Coverage1.5 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×5.18 Mb (49.6%)
Breadth ≥ 2×2.13 Mb (20.4%)
Breadth ≥ 5×139.3 kb (1.3%)
Breadth ≥ 10×2.5 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 19, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 20

Coverage Statistics
MetricValue
Mean0.87×
Median0.00×
Min0.00×
Max14.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage5.15 Mb (50.2%)
1–5× Coverage5.02 Mb (49.0%)
6–10× Coverage78.0 kb (0.8%)
>10× Coverage2.2 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×5.10 Mb (49.8%)
Breadth ≥ 2×2.19 Mb (21.4%)
Breadth ≥ 5×166.9 kb (1.6%)
Breadth ≥ 10×5.2 kb (0.1%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 20, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 21

Coverage Statistics
MetricValue
Mean1.06×
Median1.00×
Min0.00×
Max12.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage3.10 Mb (44.4%)
1–5× Coverage3.80 Mb (54.5%)
6–10× Coverage76.5 kb (1.1%)
>10× Coverage808 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×3.88 Mb (55.6%)
Breadth ≥ 2×1.89 Mb (27.1%)
Breadth ≥ 5×185.0 kb (2.7%)
Breadth ≥ 10×1.8 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 21, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 22

Coverage Statistics
MetricValue
Mean1.34×
Median1.00×
Min0.00×
Max261.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage2.98 Mb (44.6%)
1–5× Coverage3.63 Mb (54.5%)
6–10× Coverage28.0 kb (0.4%)
>10× Coverage32.0 kb (0.5%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×3.69 Mb (55.4%)
Breadth ≥ 2×1.68 Mb (25.1%)
Breadth ≥ 5×129.2 kb (1.9%)
Breadth ≥ 10×33.5 kb (0.5%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 22, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 23

Coverage Statistics
MetricValue
Mean1.16×
Median1.00×
Min0.00×
Max22.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage2.59 Mb (42.4%)
1–5× Coverage3.42 Mb (56.0%)
6–10× Coverage89.7 kb (1.5%)
>10× Coverage11.9 kb (0.2%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×3.52 Mb (57.6%)
Breadth ≥ 2×1.79 Mb (29.3%)
Breadth ≥ 5×200.2 kb (3.3%)
Breadth ≥ 10×16.4 kb (0.3%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 23, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 24

Coverage Statistics
MetricValue
Mean1.84×
Median1.00×
Min0.00×
Max37.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage1.97 Mb (33.5%)
1–5× Coverage3.54 Mb (60.1%)
6–10× Coverage210.3 kb (3.6%)
>10× Coverage164.7 kb (2.8%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×3.91 Mb (66.5%)
Breadth ≥ 2×2.22 Mb (37.7%)
Breadth ≥ 5×505.3 kb (8.6%)
Breadth ≥ 10×191.9 kb (3.3%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 24, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 25

Coverage Statistics
MetricValue
Mean1.27×
Median1.00×
Min0.00×
Max17.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage1.97 Mb (38.5%)
1–5× Coverage3.07 Mb (59.8%)
6–10× Coverage79.8 kb (1.6%)
>10× Coverage5.6 kb (0.1%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×3.16 Mb (61.5%)
Breadth ≥ 2×1.71 Mb (33.4%)
Breadth ≥ 5×194.6 kb (3.8%)
Breadth ≥ 10×8.1 kb (0.2%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 25, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 26

Coverage Statistics
MetricValue
Mean1.44×
Median1.00×
Min0.00×
Max206.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage1.61 Mb (33.2%)
1–5× Coverage3.17 Mb (65.3%)
6–10× Coverage68.3 kb (1.4%)
>10× Coverage7.2 kb (0.1%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×3.25 Mb (66.8%)
Breadth ≥ 2×1.81 Mb (37.2%)
Breadth ≥ 5×187.7 kb (3.9%)
Breadth ≥ 10×9.9 kb (0.2%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 26, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 27

Coverage Statistics
MetricValue
Mean1.01×
Median1.00×
Min0.00×
Max83.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage2.28 Mb (48.5%)
1–5× Coverage2.37 Mb (50.6%)
6–10× Coverage26.7 kb (0.6%)
>10× Coverage13.1 kb (0.3%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×2.41 Mb (51.5%)
Breadth ≥ 2×1.16 Mb (24.8%)
Breadth ≥ 5×88.5 kb (1.9%)
Breadth ≥ 10×14.2 kb (0.3%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 27, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 28

Coverage Statistics
MetricValue
Mean1.76×
Median1.00×
Min0.00×
Max39.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage901.4 kb (27.6%)
1–5× Coverage2.25 Mb (68.9%)
6–10× Coverage97.8 kb (3.0%)
>10× Coverage15.6 kb (0.5%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×2.36 Mb (72.4%)
Breadth ≥ 2×1.50 Mb (45.9%)
Breadth ≥ 5×223.7 kb (6.9%)
Breadth ≥ 10×19.8 kb (0.6%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 28, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 29

Coverage Statistics
MetricValue
Mean1.85×
Median2.00×
Min0.00×
Max13.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage519.9 kb (20.6%)
1–5× Coverage1.94 Mb (76.8%)
6–10× Coverage65.7 kb (2.6%)
>10× Coverage330 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×2.01 Mb (79.4%)
Breadth ≥ 2×1.32 Mb (52.3%)
Breadth ≥ 5×154.8 kb (6.1%)
Breadth ≥ 10×584 bp (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 29, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 29 unlocalized

Coverage Statistics
MetricValue
Mean1.88×
Median2.00×
Min0.00×
Max25.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage30.4 kb (21.7%)
1–5× Coverage106.5 kb (76.1%)
6–10× Coverage2.5 kb (1.8%)
>10× Coverage642 bp (0.5%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×109.6 kb (78.3%)
Breadth ≥ 2×72.2 kb (51.6%)
Breadth ≥ 5×6.7 kb (4.8%)
Breadth ≥ 10×749 bp (0.5%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 29 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 30

Coverage Statistics
MetricValue
Mean4.07×
Median1.00×
Min0.00×
Max224.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage718.2 kb (36.1%)
1–5× Coverage967.3 kb (48.6%)
6–10× Coverage139.1 kb (7.0%)
>10× Coverage166.8 kb (8.4%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×1.27 Mb (63.9%)
Breadth ≥ 2×868.2 kb (43.6%)
Breadth ≥ 5×377.8 kb (19.0%)
Breadth ≥ 10×180.3 kb (9.1%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 30, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 31

Coverage Statistics
MetricValue
Mean1.82×
Median1.00×
Min0.00×
Max109.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage353.8 kb (34.5%)
1–5× Coverage629.8 kb (61.4%)
6–10× Coverage25.6 kb (2.5%)
>10× Coverage17.0 kb (1.7%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×672.4 kb (65.5%)
Breadth ≥ 2×399.5 kb (38.9%)
Breadth ≥ 5×65.5 kb (6.4%)
Breadth ≥ 10×18.4 kb (1.8%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 31, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 32

Coverage Statistics
MetricValue
Mean3.07×
Median2.00×
Min0.00×
Max33.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage248.0 kb (24.6%)
1–5× Coverage578.0 kb (57.3%)
6–10× Coverage133.1 kb (13.2%)
>10× Coverage49.9 kb (4.9%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×760.9 kb (75.4%)
Breadth ≥ 2×561.9 kb (55.7%)
Breadth ≥ 5×243.5 kb (24.1%)
Breadth ≥ 10×64.9 kb (6.4%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 32, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 33

Coverage Statistics
MetricValue
Mean2.91×
Median2.00×
Min0.00×
Max104.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage197.5 kb (23.6%)
1–5× Coverage539.0 kb (64.4%)
6–10× Coverage55.8 kb (6.7%)
>10× Coverage44.0 kb (5.3%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×638.9 kb (76.4%)
Breadth ≥ 2×444.4 kb (53.1%)
Breadth ≥ 5×132.2 kb (15.8%)
Breadth ≥ 10×50.1 kb (6.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 33, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 34

Coverage Statistics
MetricValue
Mean4.92×
Median2.00×
Min0.00×
Max460.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage137.2 kb (19.6%)
1–5× Coverage494.1 kb (70.7%)
6–10× Coverage41.1 kb (5.9%)
>10× Coverage26.8 kb (3.8%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×562.0 kb (80.4%)
Breadth ≥ 2×374.5 kb (53.6%)
Breadth ≥ 5×93.9 kb (13.4%)
Breadth ≥ 10×31.0 kb (4.4%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 34, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 34 unlocalized

Coverage Statistics
MetricValue
Mean1.77×
Median1.00×
Min0.00×
Max18.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage26.8 kb (26.5%)
1–5× Coverage70.0 kb (69.3%)
6–10× Coverage2.6 kb (2.6%)
>10× Coverage1.6 kb (1.6%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×74.2 kb (73.5%)
Breadth ≥ 2×45.9 kb (45.5%)
Breadth ≥ 5×6.3 kb (6.2%)
Breadth ≥ 10×2.0 kb (2.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 34 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 35

Coverage Statistics
MetricValue
Mean1.49×
Median1.00×
Min0.00×
Max19.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage84.5 kb (43.0%)
1–5× Coverage101.9 kb (51.9%)
6–10× Coverage7.8 kb (4.0%)
>10× Coverage2.2 kb (1.1%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×111.9 kb (57.0%)
Breadth ≥ 2×67.7 kb (34.5%)
Breadth ≥ 5×15.6 kb (7.9%)
Breadth ≥ 10×2.8 kb (1.4%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 35, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 35 unlocalized

Coverage Statistics
MetricValue
Mean1.94×
Median1.00×
Min0.00×
Max49.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage97.8 kb (31.6%)
1–5× Coverage195.2 kb (63.1%)
6–10× Coverage12.2 kb (3.9%)
>10× Coverage4.2 kb (1.3%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×211.6 kb (68.4%)
Breadth ≥ 2×131.9 kb (42.6%)
Breadth ≥ 5×28.4 kb (9.2%)
Breadth ≥ 10×4.6 kb (1.5%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 35 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 36

Coverage Statistics
MetricValue
Mean17.62×
Median3.00×
Min0.00×
Max1168.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage61.9 kb (15.6%)
1–5× Coverage233.7 kb (59.0%)
6–10× Coverage58.6 kb (14.8%)
>10× Coverage42.1 kb (10.6%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×334.4 kb (84.4%)
Breadth ≥ 2×274.8 kb (69.4%)
Breadth ≥ 5×129.2 kb (32.6%)
Breadth ≥ 10×45.7 kb (11.5%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 36, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 37

Coverage Statistics
MetricValue
Mean1.88×
Median2.00×
Min0.00×
Max9.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage17.8 kb (17.4%)
1–5× Coverage81.5 kb (79.8%)
6–10× Coverage2.8 kb (2.7%)
>10× Coverage0 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×84.3 kb (82.6%)
Breadth ≥ 2×54.1 kb (53.0%)
Breadth ≥ 5×4.4 kb (4.3%)
Breadth ≥ 10×0 bp (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 37, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 37 unlocalized

Coverage Statistics
MetricValue
Mean2.09×
Median2.00×
Min0.00×
Max21.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage53.8 kb (20.7%)
1–5× Coverage194.3 kb (74.8%)
6–10× Coverage9.5 kb (3.7%)
>10× Coverage2.1 kb (0.8%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×205.9 kb (79.3%)
Breadth ≥ 2×145.1 kb (55.9%)
Breadth ≥ 5×24.8 kb (9.5%)
Breadth ≥ 10×2.5 kb (1.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 37 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 38

Coverage Statistics
MetricValue
Mean1.52×
Median0.00×
Min0.00×
Max20.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage27.5 kb (50.2%)
1–5× Coverage23.8 kb (43.3%)
6–10× Coverage1.8 kb (3.2%)
>10× Coverage1.8 kb (3.3%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×27.4 kb (49.8%)
Breadth ≥ 2×17.6 kb (32.1%)
Breadth ≥ 5×4.1 kb (7.4%)
Breadth ≥ 10×2.1 kb (3.7%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 38, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome 38 unlocalized

Coverage Statistics
MetricValue
Mean1.81×
Median2.00×
Min0.00×
Max7.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage5.3 kb (14.4%)
1–5× Coverage31.3 kb (84.5%)
6–10× Coverage427 bp (1.2%)
>10× Coverage0 bp (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×31.7 kb (85.6%)
Breadth ≥ 2×19.4 kb (52.3%)
Breadth ≥ 5×2.0 kb (5.4%)
Breadth ≥ 10×0 bp (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome 38 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome W

Coverage Statistics
MetricValue
Mean1.22×
Median1.00×
Min0.00×
Max99.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage2.62 Mb (38.6%)
1–5× Coverage4.07 Mb (59.8%)
6–10× Coverage93.1 kb (1.4%)
>10× Coverage16.5 kb (0.2%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×4.18 Mb (61.4%)
Breadth ≥ 2×2.06 Mb (30.3%)
Breadth ≥ 5×188.5 kb (2.8%)
Breadth ≥ 10×22.1 kb (0.3%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome W, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome W unlocalized

Coverage Statistics
MetricValue
Mean1.06×
Median1.00×
Min0.00×
Max62.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage1.35 Mb (42.3%)
1–5× Coverage1.79 Mb (56.2%)
6–10× Coverage40.5 kb (1.3%)
>10× Coverage4.7 kb (0.1%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×1.83 Mb (57.7%)
Breadth ≥ 2×806.3 kb (25.4%)
Breadth ≥ 5×79.6 kb (2.5%)
Breadth ≥ 10×6.1 kb (0.2%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome W unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

chromosome Z

Coverage Statistics
MetricValue
Mean0.26×
Median0.00×
Min0.00×
Max22.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage59.78 Mb (79.4%)
1–5× Coverage15.47 Mb (20.5%)
6–10× Coverage77.2 kb (0.1%)
>10× Coverage12.9 kb (0.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×15.56 Mb (20.6%)
Breadth ≥ 2×2.62 Mb (3.5%)
Breadth ≥ 5×140.1 kb (0.2%)
Breadth ≥ 10×19.3 kb (0.0%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across chromosome Z, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.

unknown

Coverage Statistics
MetricValue
Mean2.62×
Median1.00×
Min0.00×
Max395.00×

Statistical overview of how coverage is distributed across all mapped positions.

Coverage Categories (bp / %)
CategoryValue
0× Coverage4.01 Mb (45.2%)
1–5× Coverage4.10 Mb (46.1%)
6–10× Coverage413.9 kb (4.7%)
>10× Coverage356.3 kb (4.0%)

How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.

Breadth of Coverage (bp / %)
ThresholdCovered Bases
Breadth ≥ 1×4.87 Mb (54.8%)
Breadth ≥ 2×2.98 Mb (33.6%)
Breadth ≥ 5×1.00 Mb (11.3%)
Breadth ≥ 10×398.8 kb (4.5%)

Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.

Coverage plot (10 kb bins)

This plot shows the average coverage across unknown, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.