This report provides a detailed overview of genome coverage based on sequencing data from a field-collected sample. It is intended to help assess the overall quality of the sample by evaluating how well and how evenly the genome is covered. The included statistics and plots allow you to determine whether the sequencing data is sufficient to support downstream applications such as genome assembly or taxonomic profiling. This overview is especially useful for making quick decisions in field settings — for example, to judge whether a sample warrants further processing or whether additional sequencing may be required.
| Metric | Value |
|---|---|
| Mean | 0.59× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 1168.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 640.70 Mb (62.4%) |
| 1–5× Coverage | 381.43 Mb (37.1%) |
| 6–10× Coverage | 3.52 Mb (0.3%) |
| >10× Coverage | 1.12 Mb (0.1%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 386.07 Mb (37.6%) |
| Breadth ≥ 2× | 117.62 Mb (11.5%) |
| Breadth ≥ 5× | 8.41 Mb (0.8%) |
| Breadth ≥ 10× | 1.32 Mb (0.1%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
For Lagopus muta, a total of 691,811 primary mapped reads were detected based on the reference alignment. This includes only reads that are mapped, non-secondary, and non-supplementary.
| Metric | Value |
|---|---|
| Total Sequenced Bases | 607.56 Mb |
| Reference Genome Size | 1026.77 Mb |
Sequencing yield compared to reference genome length.
This plot shows the percentage of each region that is covered by at least one read. Regions with high breadth are likely to be informative for downstream analyses such as (reference-guided) assembly or alignment-based profiling.
The breadth of coverage refers to the percentage of genome bases sequenced at or above a given sequencing depth.
This cumulative plot shows the percentage of bases in the genome that are covered at or above a given coverage threshold (e.g., 10×). It provides a quick overview of how much of the genome meets typical analysis requirements. For example, if 95% of bases have ≥10× coverage, variant calling is likely reliable for most regions.
Adjust this slider to change the upper limit of the color scale. Lower values increase contrast in low-coverage regions, while higher values reveal high-coverage peaks.
This heatmap provides a chromosome-by-position overview of coverage depth across the genome. Each cell represents a fixed-size genomic bin (100.0 kb), colored by its average coverage.
| Metric | Value |
|---|---|
| Mean | 0.46× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 22.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 127.89 Mb (65.6%) |
| 1–5× Coverage | 66.67 Mb (34.2%) |
| 6–10× Coverage | 316.3 kb (0.2%) |
| >10× Coverage | 30.8 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 67.02 Mb (34.4%) |
| Breadth ≥ 2× | 16.01 Mb (8.2%) |
| Breadth ≥ 5× | 659.1 kb (0.3%) |
| Breadth ≥ 10× | 45.5 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 1, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.45× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 60.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 72.56 Mb (65.7%) |
| 1–5× Coverage | 37.79 Mb (34.2%) |
| 6–10× Coverage | 85.2 kb (0.1%) |
| >10× Coverage | 5.2 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 37.88 Mb (34.3%) |
| Breadth ≥ 2× | 8.90 Mb (8.1%) |
| Breadth ≥ 5× | 211.3 kb (0.2%) |
| Breadth ≥ 10× | 7.5 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 2, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.45× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 46.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 62.23 Mb (65.8%) |
| 1–5× Coverage | 32.24 Mb (34.1%) |
| 6–10× Coverage | 90.2 kb (0.1%) |
| >10× Coverage | 17.0 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 32.34 Mb (34.2%) |
| Breadth ≥ 2× | 7.44 Mb (7.9%) |
| Breadth ≥ 5× | 215.0 kb (0.2%) |
| Breadth ≥ 10× | 21.9 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 3, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.52× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 47.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 144.7 kb (40.7%) |
| 1–5× Coverage | 196.4 kb (55.2%) |
| 6–10× Coverage | 8.4 kb (2.4%) |
| >10× Coverage | 6.3 kb (1.8%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 211.1 kb (59.3%) |
| Breadth ≥ 2× | 115.1 kb (32.3%) |
| Breadth ≥ 5× | 20.1 kb (5.7%) |
| Breadth ≥ 10× | 7.2 kb (2.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 3 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.47× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 71.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 46.15 Mb (64.8%) |
| 1–5× Coverage | 24.98 Mb (35.1%) |
| 6–10× Coverage | 92.5 kb (0.1%) |
| >10× Coverage | 1.7 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 25.08 Mb (35.2%) |
| Breadth ≥ 2× | 6.11 Mb (8.6%) |
| Breadth ≥ 5× | 223.0 kb (0.3%) |
| Breadth ≥ 10× | 3.4 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 4, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.55× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 29.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 40.75 Mb (61.9%) |
| 1–5× Coverage | 25.00 Mb (37.9%) |
| 6–10× Coverage | 114.3 kb (0.2%) |
| >10× Coverage | 15.0 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 25.13 Mb (38.1%) |
| Breadth ≥ 2× | 7.36 Mb (11.2%) |
| Breadth ≥ 5× | 295.6 kb (0.4%) |
| Breadth ≥ 10× | 18.1 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 5, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.49× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 19.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 38.03 Mb (63.8%) |
| 1–5× Coverage | 21.46 Mb (36.0%) |
| 6–10× Coverage | 90.5 kb (0.2%) |
| >10× Coverage | 3.8 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 21.56 Mb (36.2%) |
| Breadth ≥ 2× | 5.53 Mb (9.3%) |
| Breadth ≥ 5× | 206.0 kb (0.3%) |
| Breadth ≥ 10× | 6.7 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 6, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.49× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 11.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 33.48 Mb (64.5%) |
| 1–5× Coverage | 18.35 Mb (35.3%) |
| 6–10× Coverage | 80.5 kb (0.2%) |
| >10× Coverage | 273 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 18.43 Mb (35.5%) |
| Breadth ≥ 2× | 4.73 Mb (9.1%) |
| Breadth ≥ 5× | 204.2 kb (0.4%) |
| Breadth ≥ 10× | 1.4 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 7, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.55× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 22.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 22.56 Mb (61.4%) |
| 1–5× Coverage | 14.10 Mb (38.4%) |
| 6–10× Coverage | 87.2 kb (0.2%) |
| >10× Coverage | 7.3 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 14.19 Mb (38.6%) |
| Breadth ≥ 2× | 4.16 Mb (11.3%) |
| Breadth ≥ 5× | 185.3 kb (0.5%) |
| Breadth ≥ 10× | 10.4 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 8, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.60× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 21.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 13.84 Mb (59.5%) |
| 1–5× Coverage | 9.35 Mb (40.2%) |
| 6–10× Coverage | 53.6 kb (0.2%) |
| >10× Coverage | 3.2 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 9.41 Mb (40.5%) |
| Breadth ≥ 2× | 2.86 Mb (12.3%) |
| Breadth ≥ 5× | 144.8 kb (0.6%) |
| Breadth ≥ 10× | 4.9 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 9, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.65× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 15.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 11.45 Mb (57.5%) |
| 1–5× Coverage | 8.42 Mb (42.3%) |
| 6–10× Coverage | 44.5 kb (0.2%) |
| >10× Coverage | 2.5 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 8.47 Mb (42.5%) |
| Breadth ≥ 2× | 2.87 Mb (14.4%) |
| Breadth ≥ 5× | 129.3 kb (0.6%) |
| Breadth ≥ 10× | 3.4 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 10, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.65× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 95.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 11.66 Mb (58.8%) |
| 1–5× Coverage | 8.09 Mb (40.8%) |
| 6–10× Coverage | 82.2 kb (0.4%) |
| >10× Coverage | 8.9 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 8.19 Mb (41.2%) |
| Breadth ≥ 2× | 2.71 Mb (13.7%) |
| Breadth ≥ 5× | 184.2 kb (0.9%) |
| Breadth ≥ 10× | 14.3 kb (0.1%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 11, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.66× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 15.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 11.27 Mb (58.4%) |
| 1–5× Coverage | 7.95 Mb (41.2%) |
| 6–10× Coverage | 79.1 kb (0.4%) |
| >10× Coverage | 2.4 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 8.03 Mb (41.6%) |
| Breadth ≥ 2× | 2.82 Mb (14.6%) |
| Breadth ≥ 5× | 197.2 kb (1.0%) |
| Breadth ≥ 10× | 5.2 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 12, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.62× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 231.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 11.19 Mb (58.7%) |
| 1–5× Coverage | 7.82 Mb (41.0%) |
| 6–10× Coverage | 37.1 kb (0.2%) |
| >10× Coverage | 2.9 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 7.86 Mb (41.3%) |
| Breadth ≥ 2× | 2.57 Mb (13.5%) |
| Breadth ≥ 5× | 102.3 kb (0.5%) |
| Breadth ≥ 10× | 5.1 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 13, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.66× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 26.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 10.29 Mb (57.3%) |
| 1–5× Coverage | 7.62 Mb (42.4%) |
| 6–10× Coverage | 58.3 kb (0.3%) |
| >10× Coverage | 6.2 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 7.68 Mb (42.7%) |
| Breadth ≥ 2× | 2.60 Mb (14.5%) |
| Breadth ≥ 5× | 136.1 kb (0.8%) |
| Breadth ≥ 10× | 7.3 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 14, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.71× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 11.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 8.57 Mb (55.8%) |
| 1–5× Coverage | 6.72 Mb (43.8%) |
| 6–10× Coverage | 56.5 kb (0.4%) |
| >10× Coverage | 113 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 6.78 Mb (44.2%) |
| Breadth ≥ 2× | 2.54 Mb (16.5%) |
| Breadth ≥ 5× | 165.4 kb (1.1%) |
| Breadth ≥ 10× | 615 bp (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 15, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.77× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 13.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 7.90 Mb (53.8%) |
| 1–5× Coverage | 6.71 Mb (45.7%) |
| 6–10× Coverage | 73.0 kb (0.5%) |
| >10× Coverage | 480 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 6.78 Mb (46.2%) |
| Breadth ≥ 2× | 2.70 Mb (18.4%) |
| Breadth ≥ 5× | 164.7 kb (1.1%) |
| Breadth ≥ 10× | 980 bp (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 16, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.73× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 10.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 6.91 Mb (54.5%) |
| 1–5× Coverage | 5.74 Mb (45.2%) |
| 6–10× Coverage | 36.4 kb (0.3%) |
| >10× Coverage | 0 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 5.78 Mb (45.5%) |
| Breadth ≥ 2× | 2.17 Mb (17.1%) |
| Breadth ≥ 5× | 106.1 kb (0.8%) |
| Breadth ≥ 10× | 138 bp (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 17, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.80× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 12.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 5.64 Mb (51.8%) |
| 1–5× Coverage | 5.21 Mb (47.8%) |
| 6–10× Coverage | 47.9 kb (0.4%) |
| >10× Coverage | 525 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 5.25 Mb (48.2%) |
| Breadth ≥ 2× | 2.07 Mb (19.0%) |
| Breadth ≥ 5× | 143.5 kb (1.3%) |
| Breadth ≥ 10× | 1.3 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 18, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.84× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 20.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 5.27 Mb (50.4%) |
| 1–5× Coverage | 5.13 Mb (49.1%) |
| 6–10× Coverage | 51.7 kb (0.5%) |
| >10× Coverage | 1.5 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 5.18 Mb (49.6%) |
| Breadth ≥ 2× | 2.13 Mb (20.4%) |
| Breadth ≥ 5× | 139.3 kb (1.3%) |
| Breadth ≥ 10× | 2.5 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 19, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.87× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 14.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 5.15 Mb (50.2%) |
| 1–5× Coverage | 5.02 Mb (49.0%) |
| 6–10× Coverage | 78.0 kb (0.8%) |
| >10× Coverage | 2.2 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 5.10 Mb (49.8%) |
| Breadth ≥ 2× | 2.19 Mb (21.4%) |
| Breadth ≥ 5× | 166.9 kb (1.6%) |
| Breadth ≥ 10× | 5.2 kb (0.1%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 20, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.06× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 12.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 3.10 Mb (44.4%) |
| 1–5× Coverage | 3.80 Mb (54.5%) |
| 6–10× Coverage | 76.5 kb (1.1%) |
| >10× Coverage | 808 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 3.88 Mb (55.6%) |
| Breadth ≥ 2× | 1.89 Mb (27.1%) |
| Breadth ≥ 5× | 185.0 kb (2.7%) |
| Breadth ≥ 10× | 1.8 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 21, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.34× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 261.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 2.98 Mb (44.6%) |
| 1–5× Coverage | 3.63 Mb (54.5%) |
| 6–10× Coverage | 28.0 kb (0.4%) |
| >10× Coverage | 32.0 kb (0.5%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 3.69 Mb (55.4%) |
| Breadth ≥ 2× | 1.68 Mb (25.1%) |
| Breadth ≥ 5× | 129.2 kb (1.9%) |
| Breadth ≥ 10× | 33.5 kb (0.5%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 22, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.16× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 22.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 2.59 Mb (42.4%) |
| 1–5× Coverage | 3.42 Mb (56.0%) |
| 6–10× Coverage | 89.7 kb (1.5%) |
| >10× Coverage | 11.9 kb (0.2%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 3.52 Mb (57.6%) |
| Breadth ≥ 2× | 1.79 Mb (29.3%) |
| Breadth ≥ 5× | 200.2 kb (3.3%) |
| Breadth ≥ 10× | 16.4 kb (0.3%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 23, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.84× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 37.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 1.97 Mb (33.5%) |
| 1–5× Coverage | 3.54 Mb (60.1%) |
| 6–10× Coverage | 210.3 kb (3.6%) |
| >10× Coverage | 164.7 kb (2.8%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 3.91 Mb (66.5%) |
| Breadth ≥ 2× | 2.22 Mb (37.7%) |
| Breadth ≥ 5× | 505.3 kb (8.6%) |
| Breadth ≥ 10× | 191.9 kb (3.3%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 24, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.27× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 17.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 1.97 Mb (38.5%) |
| 1–5× Coverage | 3.07 Mb (59.8%) |
| 6–10× Coverage | 79.8 kb (1.6%) |
| >10× Coverage | 5.6 kb (0.1%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 3.16 Mb (61.5%) |
| Breadth ≥ 2× | 1.71 Mb (33.4%) |
| Breadth ≥ 5× | 194.6 kb (3.8%) |
| Breadth ≥ 10× | 8.1 kb (0.2%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 25, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.44× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 206.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 1.61 Mb (33.2%) |
| 1–5× Coverage | 3.17 Mb (65.3%) |
| 6–10× Coverage | 68.3 kb (1.4%) |
| >10× Coverage | 7.2 kb (0.1%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 3.25 Mb (66.8%) |
| Breadth ≥ 2× | 1.81 Mb (37.2%) |
| Breadth ≥ 5× | 187.7 kb (3.9%) |
| Breadth ≥ 10× | 9.9 kb (0.2%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 26, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.01× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 83.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 2.28 Mb (48.5%) |
| 1–5× Coverage | 2.37 Mb (50.6%) |
| 6–10× Coverage | 26.7 kb (0.6%) |
| >10× Coverage | 13.1 kb (0.3%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 2.41 Mb (51.5%) |
| Breadth ≥ 2× | 1.16 Mb (24.8%) |
| Breadth ≥ 5× | 88.5 kb (1.9%) |
| Breadth ≥ 10× | 14.2 kb (0.3%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 27, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.76× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 39.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 901.4 kb (27.6%) |
| 1–5× Coverage | 2.25 Mb (68.9%) |
| 6–10× Coverage | 97.8 kb (3.0%) |
| >10× Coverage | 15.6 kb (0.5%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 2.36 Mb (72.4%) |
| Breadth ≥ 2× | 1.50 Mb (45.9%) |
| Breadth ≥ 5× | 223.7 kb (6.9%) |
| Breadth ≥ 10× | 19.8 kb (0.6%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 28, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.85× |
| Median | 2.00× |
| Min | 0.00× |
| Max | 13.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 519.9 kb (20.6%) |
| 1–5× Coverage | 1.94 Mb (76.8%) |
| 6–10× Coverage | 65.7 kb (2.6%) |
| >10× Coverage | 330 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 2.01 Mb (79.4%) |
| Breadth ≥ 2× | 1.32 Mb (52.3%) |
| Breadth ≥ 5× | 154.8 kb (6.1%) |
| Breadth ≥ 10× | 584 bp (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 29, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.88× |
| Median | 2.00× |
| Min | 0.00× |
| Max | 25.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 30.4 kb (21.7%) |
| 1–5× Coverage | 106.5 kb (76.1%) |
| 6–10× Coverage | 2.5 kb (1.8%) |
| >10× Coverage | 642 bp (0.5%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 109.6 kb (78.3%) |
| Breadth ≥ 2× | 72.2 kb (51.6%) |
| Breadth ≥ 5× | 6.7 kb (4.8%) |
| Breadth ≥ 10× | 749 bp (0.5%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 29 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 4.07× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 224.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 718.2 kb (36.1%) |
| 1–5× Coverage | 967.3 kb (48.6%) |
| 6–10× Coverage | 139.1 kb (7.0%) |
| >10× Coverage | 166.8 kb (8.4%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 1.27 Mb (63.9%) |
| Breadth ≥ 2× | 868.2 kb (43.6%) |
| Breadth ≥ 5× | 377.8 kb (19.0%) |
| Breadth ≥ 10× | 180.3 kb (9.1%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 30, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.82× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 109.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 353.8 kb (34.5%) |
| 1–5× Coverage | 629.8 kb (61.4%) |
| 6–10× Coverage | 25.6 kb (2.5%) |
| >10× Coverage | 17.0 kb (1.7%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 672.4 kb (65.5%) |
| Breadth ≥ 2× | 399.5 kb (38.9%) |
| Breadth ≥ 5× | 65.5 kb (6.4%) |
| Breadth ≥ 10× | 18.4 kb (1.8%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 31, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 3.07× |
| Median | 2.00× |
| Min | 0.00× |
| Max | 33.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 248.0 kb (24.6%) |
| 1–5× Coverage | 578.0 kb (57.3%) |
| 6–10× Coverage | 133.1 kb (13.2%) |
| >10× Coverage | 49.9 kb (4.9%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 760.9 kb (75.4%) |
| Breadth ≥ 2× | 561.9 kb (55.7%) |
| Breadth ≥ 5× | 243.5 kb (24.1%) |
| Breadth ≥ 10× | 64.9 kb (6.4%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 32, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 2.91× |
| Median | 2.00× |
| Min | 0.00× |
| Max | 104.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 197.5 kb (23.6%) |
| 1–5× Coverage | 539.0 kb (64.4%) |
| 6–10× Coverage | 55.8 kb (6.7%) |
| >10× Coverage | 44.0 kb (5.3%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 638.9 kb (76.4%) |
| Breadth ≥ 2× | 444.4 kb (53.1%) |
| Breadth ≥ 5× | 132.2 kb (15.8%) |
| Breadth ≥ 10× | 50.1 kb (6.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 33, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 4.92× |
| Median | 2.00× |
| Min | 0.00× |
| Max | 460.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 137.2 kb (19.6%) |
| 1–5× Coverage | 494.1 kb (70.7%) |
| 6–10× Coverage | 41.1 kb (5.9%) |
| >10× Coverage | 26.8 kb (3.8%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 562.0 kb (80.4%) |
| Breadth ≥ 2× | 374.5 kb (53.6%) |
| Breadth ≥ 5× | 93.9 kb (13.4%) |
| Breadth ≥ 10× | 31.0 kb (4.4%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 34, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.77× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 18.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 26.8 kb (26.5%) |
| 1–5× Coverage | 70.0 kb (69.3%) |
| 6–10× Coverage | 2.6 kb (2.6%) |
| >10× Coverage | 1.6 kb (1.6%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 74.2 kb (73.5%) |
| Breadth ≥ 2× | 45.9 kb (45.5%) |
| Breadth ≥ 5× | 6.3 kb (6.2%) |
| Breadth ≥ 10× | 2.0 kb (2.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 34 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.49× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 19.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 84.5 kb (43.0%) |
| 1–5× Coverage | 101.9 kb (51.9%) |
| 6–10× Coverage | 7.8 kb (4.0%) |
| >10× Coverage | 2.2 kb (1.1%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 111.9 kb (57.0%) |
| Breadth ≥ 2× | 67.7 kb (34.5%) |
| Breadth ≥ 5× | 15.6 kb (7.9%) |
| Breadth ≥ 10× | 2.8 kb (1.4%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 35, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.94× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 49.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 97.8 kb (31.6%) |
| 1–5× Coverage | 195.2 kb (63.1%) |
| 6–10× Coverage | 12.2 kb (3.9%) |
| >10× Coverage | 4.2 kb (1.3%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 211.6 kb (68.4%) |
| Breadth ≥ 2× | 131.9 kb (42.6%) |
| Breadth ≥ 5× | 28.4 kb (9.2%) |
| Breadth ≥ 10× | 4.6 kb (1.5%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 35 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 17.62× |
| Median | 3.00× |
| Min | 0.00× |
| Max | 1168.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 61.9 kb (15.6%) |
| 1–5× Coverage | 233.7 kb (59.0%) |
| 6–10× Coverage | 58.6 kb (14.8%) |
| >10× Coverage | 42.1 kb (10.6%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 334.4 kb (84.4%) |
| Breadth ≥ 2× | 274.8 kb (69.4%) |
| Breadth ≥ 5× | 129.2 kb (32.6%) |
| Breadth ≥ 10× | 45.7 kb (11.5%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 36, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.88× |
| Median | 2.00× |
| Min | 0.00× |
| Max | 9.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 17.8 kb (17.4%) |
| 1–5× Coverage | 81.5 kb (79.8%) |
| 6–10× Coverage | 2.8 kb (2.7%) |
| >10× Coverage | 0 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 84.3 kb (82.6%) |
| Breadth ≥ 2× | 54.1 kb (53.0%) |
| Breadth ≥ 5× | 4.4 kb (4.3%) |
| Breadth ≥ 10× | 0 bp (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 37, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 2.09× |
| Median | 2.00× |
| Min | 0.00× |
| Max | 21.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 53.8 kb (20.7%) |
| 1–5× Coverage | 194.3 kb (74.8%) |
| 6–10× Coverage | 9.5 kb (3.7%) |
| >10× Coverage | 2.1 kb (0.8%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 205.9 kb (79.3%) |
| Breadth ≥ 2× | 145.1 kb (55.9%) |
| Breadth ≥ 5× | 24.8 kb (9.5%) |
| Breadth ≥ 10× | 2.5 kb (1.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 37 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.52× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 20.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 27.5 kb (50.2%) |
| 1–5× Coverage | 23.8 kb (43.3%) |
| 6–10× Coverage | 1.8 kb (3.2%) |
| >10× Coverage | 1.8 kb (3.3%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 27.4 kb (49.8%) |
| Breadth ≥ 2× | 17.6 kb (32.1%) |
| Breadth ≥ 5× | 4.1 kb (7.4%) |
| Breadth ≥ 10× | 2.1 kb (3.7%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 38, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.81× |
| Median | 2.00× |
| Min | 0.00× |
| Max | 7.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 5.3 kb (14.4%) |
| 1–5× Coverage | 31.3 kb (84.5%) |
| 6–10× Coverage | 427 bp (1.2%) |
| >10× Coverage | 0 bp (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 31.7 kb (85.6%) |
| Breadth ≥ 2× | 19.4 kb (52.3%) |
| Breadth ≥ 5× | 2.0 kb (5.4%) |
| Breadth ≥ 10× | 0 bp (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome 38 unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.22× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 99.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 2.62 Mb (38.6%) |
| 1–5× Coverage | 4.07 Mb (59.8%) |
| 6–10× Coverage | 93.1 kb (1.4%) |
| >10× Coverage | 16.5 kb (0.2%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 4.18 Mb (61.4%) |
| Breadth ≥ 2× | 2.06 Mb (30.3%) |
| Breadth ≥ 5× | 188.5 kb (2.8%) |
| Breadth ≥ 10× | 22.1 kb (0.3%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome W, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 1.06× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 62.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 1.35 Mb (42.3%) |
| 1–5× Coverage | 1.79 Mb (56.2%) |
| 6–10× Coverage | 40.5 kb (1.3%) |
| >10× Coverage | 4.7 kb (0.1%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 1.83 Mb (57.7%) |
| Breadth ≥ 2× | 806.3 kb (25.4%) |
| Breadth ≥ 5× | 79.6 kb (2.5%) |
| Breadth ≥ 10× | 6.1 kb (0.2%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome W unlocalized, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 0.26× |
| Median | 0.00× |
| Min | 0.00× |
| Max | 22.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 59.78 Mb (79.4%) |
| 1–5× Coverage | 15.47 Mb (20.5%) |
| 6–10× Coverage | 77.2 kb (0.1%) |
| >10× Coverage | 12.9 kb (0.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 15.56 Mb (20.6%) |
| Breadth ≥ 2× | 2.62 Mb (3.5%) |
| Breadth ≥ 5× | 140.1 kb (0.2%) |
| Breadth ≥ 10× | 19.3 kb (0.0%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across chromosome Z, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.
| Metric | Value |
|---|---|
| Mean | 2.62× |
| Median | 1.00× |
| Min | 0.00× |
| Max | 395.00× |
Statistical overview of how coverage is distributed across all mapped positions.
| Category | Value |
|---|---|
| 0× Coverage | 4.01 Mb (45.2%) |
| 1–5× Coverage | 4.10 Mb (46.1%) |
| 6–10× Coverage | 413.9 kb (4.7%) |
| >10× Coverage | 356.3 kb (4.0%) |
How much of the genome is covered at different ranges. Useful to assess how much is poorly covered or not covered at all.
| Threshold | Covered Bases |
|---|---|
| Breadth ≥ 1× | 4.87 Mb (54.8%) |
| Breadth ≥ 2× | 2.98 Mb (33.6%) |
| Breadth ≥ 5× | 1.00 Mb (11.3%) |
| Breadth ≥ 10× | 398.8 kb (4.5%) |
Breadth indicates how much of the genome is covered at or above a given coverage depth. Higher breadth indicates more uniform and complete coverage.
This plot shows the average coverage across unknown, calculated in fixed-size bins (10.0 kb). It provides a quick visual overview of how evenly the genome is covered along this region. This helps assess whether the sample delivers sufficient and consistent coverage — an important criterion for evaluating sample quality, especially in field settings or when working with limited or degraded input material. Note that due to binning, local fluctuations at single-base resolution may be smoothed or hidden. The plot is intended to highlight broad patterns, not per-base detail.